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1

Efficient counting ofk-mers in DNA sequences using a bloom filter

Páll Melsted, Jonathan K Pritchard

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 258 KB

english, 2011

2

Erratum: Near-optimal probabilistic RNA-seq quantification

Bray, Nicolas L, Pimentel, Harold, Melsted, Páll, Pachter, Lior

Journal:

Nature Biotechnology

Year:

2016

Language:

english

File:

PDF, 110 KB

english, 2016

3

Insights into imprinting from parent-of-origin phased methylomes and transcriptomes

Zink, Florian, Magnusdottir, Droplaug N., Magnusson, Olafur T., Walker, Nicolas J., Morris, Tiffany J., Sigurdsson, Asgeir, Halldorsson, Gisli H., Gudjonsson, Sigurjon A., Melsted, Pall, Ingimundardot

Journal:

Nature Genetics

Year:

2018

Language:

english

File:

PDF, 3.58 MB

english, 2018

4

GraphTyper2 enables population-scale genotyping of structural variation using pangenome graphs

Eggertsson, Hannes P., Kristmundsdottir, Snaedis, Beyter, Doruk, Jonsson, Hakon, Skuladottir, Astros, Hardarson, Marteinn T., Gudbjartsson, Daniel F., Stefansson, Kari, Halldorsson, Bjarni V., Melsted

Journal:

Nature Communications

Year:

2019

File:

PDF, 705 KB

2019

5

Bifrost: highly parallel construction and indexing of colored and compacted de Bruijn graphs

Holley, Guillaume, Melsted, PÃ¡ll

Journal:

Year:

2020

File:

PDF, 586 KB

2020

6

Randomly coloring simple hypergraphs

Alan Frieze, Páll Melsted

Journal:

Information Processing Letters

Year:

2011

Language:

english

File:

PDF, 172 KB

english, 2011

7

Genomic-scale capture and sequencing of endogenous DNA from feces

GEORGE H. PERRY, JOHN C. MARIONI, PÁLL MELSTED, YOAV GILAD

Journal:

Molecular Ecology

Year:

2010

Language:

english

File:

PDF, 7.69 MB

english, 2010

8

Does early growth delay occur in diabetic pregnancy?

Jan Fog Pedersen, Lars Melsted-Pedersen

Journal:

BJOG: An International Journal of Obstetrics & Gynaecology

Year:

1995

Language:

english

File:

PDF, 148 KB

english, 1995

9

Maximum matchings in random bipartite graphs and the space utilization of Cuckoo Hash tables

Alan Frieze, Páll Melsted

Journal:

Random Structures & Algorithms

Year:

2012

Language:

english

File:

PDF, 270 KB

english, 2012

10

A novel approach for in vitro production of bovine embryos: use of the oxoid atmosphere generating system

B. Avery, J.K. Melsted, T. Greve

Journal:

Year:

2000

Language:

english

File:

PDF, 600 KB

english, 2000

11

An Analysis of Random-Walk Cuckoo Hashing

Frieze, Alan, Melsted, Páll, Mitzenmacher, Michael

Journal:

SIAM Journal on Computing

Year:

2011

Language:

english

File:

PDF, 250 KB

english, 2011

12

Rapid tissue tests as indicators of yield, plant composition, and soil fertility for corn and soybeans

Syltie, P. W., Melsted, S. W., Walker, W. M.

Journal:

Communications in Soil Science and Plant Analysis

Year:

1972

Language:

english

File:

PDF, 483 KB

english, 1972

13

Magnesium Forms in Selected Temperate and Tropical Soils1

Mokwunye, A. Uzo, Melsted, S. W.

Journal:

Soil Science Society of America Journal

Year:

1972

Language:

english

File:

PDF, 107 KB

english, 1972

14

Phosphorus Fertility of Some Tropical Soils in Sierra Leone1

McKenzie, E., Kurtz, L. T., Melsted, S. W.

Journal:

Soil Science Society of America Journal

Year:

1977

Language:

english

File:

PDF, 149 KB

english, 1977

15

Topsoil and Subsoil Thickness Requirements for Reclamation of Nonsodic Mined-land1

Halvorson, G. A., Melsted, S. W., Schroeder, S. A., Smith, C. M., Pole, M. W.

Journal:

Soil Science Society of America Journal

Year:

1986

Language:

english

File:

PDF, 155 KB

english, 1986

16

Finding a maximum matching in a sparse random graph in O ( n ) expected time

Chebolu, Prasad, Frieze, Alan, Melsted, P'all

Journal:

Journal of the ACM

Year:

2010

Language:

english

File:

PDF, 319 KB

english, 2010

17

Spectrophotometric Determination of Bismuth with Sodium Diethyldithiocarbamate

Cheng, K. L., Bray, R. H., Melsted, S. W.

Journal:

Analytical Chemistry

Year:

1955

Language:

english

File:

PDF, 346 KB

english, 1955

18

KmerStream: streaming algorithms for k-mer abundance estimation

Melsted, P., Halldorsson, B. V.

Journal:

Year:

2014

Language:

english

File:

PDF, 220 KB

english, 2014

19

A Genome Sequence Resource for the Aye-Aye (Daubentonia madagascariensis), a Nocturnal Lemur from Madagascar

Perry, G. H., Reeves, D., Melsted, P., Ratan, A., Miller, W., Michelini, K., Louis, E. E., Pritchard, J. K., Mason, C. E., Gilad, Y.

Journal:

Genome Biology and Evolution

Year:

2012

Language:

english

File:

PDF, 526 KB

english, 2012

20

Comparative RNA sequencing reveals substantial genetic variation in endangered primates

Perry, G. H., Melsted, P., Marioni, J. C., Wang, Y., Bainer, R., Pickrell, J. K., Michelini, K., Zehr, S., Yoder, A. D., Stephens, M., Pritchard, J. K., Gilad, Y.

Journal:

Genome Research

Year:

2012

Language:

english

File:

PDF, 1.79 MB

english, 2012

21

Interrelationships between soil magnesium forms 1

Mokwunye, A. Uzo, Melsted, S. W.

Journal:

Communications in Soil Science and Plant Analysis

Year:

1973

Language:

english

File:

PDF, 265 KB

english, 1973

22

PopIns: population-scale detection of novel sequence insertions

Kehr, B., Melsted, P., Halldorsson, B. V.

Journal:

Year:

2015

Language:

english

File:

PDF, 256 KB

english, 2015

23

BamHash: a checksum program for verifying the integrity of sequence data

Óskarsdóttir, Arna, Másson, Gísli, Melsted, Páll

Journal:

Year:

2015

Language:

english

File:

PDF, 62 KB

english, 2015

24

Near-optimal probabilistic RNA-seq quantification

Bray, Nicolas L, Pimentel, Harold, Melsted, Páll, Pachter, Lior

Journal:

Nature Biotechnology

Year:

2016

Language:

english

File:

PDF, 591 KB

english, 2016

25

Spectrographic Analysis of Briquetted Unashed Plant Material

Muntz, J. H., Melsted, S. W.

Journal:

Analytical Chemistry

Year:

1955

Language:

english

File:

PDF, 415 KB

english, 1955

26

CHANGES IN ORGANIC CARBON AND NITROGEN OF MORROW PLOT SOILS UNDER DIFFERENT TREATMENTS, 1904–1973

ODELL, RUSSELL T., MELSTED, S. W., WALKER, WILLIAM M.

Journal:

Year:

1984

File:

PDF, 641 KB

1984

27

LONG-TERM TRENDS IN TOTAL SOIL N AS INFLUENCED BY CERTAIN MANAGEMENT PRACTICES

MEINTS, V. W., KURTZ, L. T., MELSTED, S. W., PECK, T. R.

Journal:

Year:

1977

File:

PDF, 462 KB

1977

28

MOVEMENT OF CHEMICALS IN SOILS BY WATER

KURTZ, L. T., MELSTED, S. W.

Journal:

Year:

1973

File:

PDF, 769 KB

1973

29

Looking into the past - the reaction of three grouse species to climate change over the last million years using whole genome sequences

Kozma, Radoslav, Melsted, Páll, Magnússon, Kristinn P., Höglund, Jacob

Journal:

Molecular Ecology

Year:

2016

Language:

english

File:

PDF, 689 KB

english, 2016

30

The Silting of Ridge Lake

STALL, J. B., GOTTSCHALK, L. C., KLINGEBIEL, A. A., SAUER, E. L., MELSTED, S. W.

Journal:

Year:

1951

File:

PDF, 63 KB

1951

31

A TENTATIVE CORRELATION FOR THE OLSEN BICARBONATE PHOSPHORUS SOIL TEST WITH WHEAT RESPONSES UNDER TURKISH SOIL CONDITIONS

YURTSEVER, NECDET, ATESALP, MEHMET, MELSTED, S. W.

Journal:

Year:

1965

File:

PDF, 290 KB

1965

32

MAGNESIUM FIXATION AND RELEASE IN SOILS OF TEMPERATE AND TROPICAL ORIGINS

MOKWUNYE, A. UZO, MELSTED, S. W.

Journal:

Year:

1973

File:

PDF, 287 KB

1973

33

BASE-EXCHANGE EQUILIBRIUMS IN SOILS AND OTHER EXCHANGE MATERIALS

MELSTED, S. W., BRAY, ROGER H.

Journal:

Year:

1947

File:

PDF, 982 KB

1947

34

SOME ASPECTS OF THE CHEMISTRY OF COBALT IN SOILS

BANERJEE, DILIP K., BRAY, ROGER H., MELSTED, S. W.

Journal:

Year:

1953

File:

PDF, 563 KB

1953

35

REMOVING INTERFERING METALS IN THE VERSENATE DETERMINATION OF CALCIUM AND MAGNESIUM

CHENG, K. L., MELSTED, S. W., BRAY, R. H.

Journal:

Year:

1953

File:

PDF, 167 KB

1953

36

USE OF N-ISOTOPE DISTRIBUTION IN NITROGEN GAS IN THE STUDY OF DENITRIFICATION

HAUCK, R. D., MELSTED, S. W., YANKWICH, PETER E.

Journal:

Year:

1958

File:

PDF, 338 KB

1958

37

The Chemistry of Zinc Added to Soils and Clays1

Nelson, J. L., Melsted, S. W.

Journal:

Soil Science Society of America Journal

Year:

1955

Language:

english

File:

PDF, 158 KB

english, 1955

38

Critical Plant Nutrient Composition Values Useful in Interpreting Plant Analysis Data1

Melsted, S. W., Motto, H. L., Peck, T. R.

Journal:

Agronomy Journal

Year:

1969

Language:

english

File:

PDF, 119 KB

english, 1969

39

Diversity in non-repetitive human sequences not found in the reference genome

Kehr, Birte, Helgadottir, Anna, Melsted, Pall, Jonsson, Hakon, Helgason, Hannes, Jonasdottir, Adalbjörg, Jonasdottir, Aslaug, Sigurdsson, Asgeir, Gylfason, Arnaldur, Halldorsson, Gisli H, Kristmundsdo

Journal:

Nature Genetics

Year:

2017

Language:

english

File:

PDF, 4.04 MB

english, 2017

40

Pseudoalignment for metagenomic read assignment

Schaeffer, L., Pimentel, H., Bray, N., Melsted, P., Pachter, L.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.20 MB

english, 2017

41

On Power

Patrick Kupper,Odinn Melsted,Irene Pallua

Journal:

NTM Zeitschrift für Geschichte der Wissenschaften, Technik und Medizin

Year:

2017

Language:

german

File:

PDF, 265 KB

german, 2017

42

Differential analysis of RNA-seq incorporating quantification uncertainty

Pimentel, Harold, Bray, Nicolas L, Puente, Suzette, Melsted, Páll, Pachter, Lior

Journal:

Year:

2017

Language:

english

File:

PDF, 709 KB

english, 2017

43

The Lair: a resource for exploratory analysis of published RNA-Seq data

Harold Pimentel,Pascal Sturmfels,Nicolas Bray,Páll Melsted…

Journal:

BMC Bioinformatics

Year:

2016

Language:

english

File:

PDF, 772 KB

english, 2016

44

Risk factors associated with diarrhea in Danish commercial mink (Neovison vison) during the pre-weaning period

Julie Melsted Birch,Jens Frederik Agger,Christina Dahlin…

Journal:

Acta Veterinaria Scandinavica

Year:

2017

Language:

english

File:

PDF, 1.60 MB

english, 2017

45

HLA class Ib in pregnancy and pregnancy-related disorders

Persson, Gry, Melsted, Wenna Nascimento, Nilsson, Line Lynge, Hviid, Thomas Vauvert F.

Journal:

Year:

2017

Language:

english

File:

PDF, 926 KB

english, 2017

46

[Advances in Agronomy] Volume 6 || New Concepts of Management of Corn Belt Soils

Year:

1954

Language:

english

File:

PDF, 2.32 MB

english, 1954

47

Preliminary Studies of Molybdenum in Illinois Soils1

Haley, L. E., Melsted, S. W.

Journal:

Soil Science Society of America Journal

Year:

1957

Language:

english

File:

PDF, 152 KB

english, 1957

48

The choriocarcinoma cell line JEG-3 upregulates regulatory T cell phenotypes and modulates pro-inflammatory cytokines through HLA-G

Melsted, Wenna Nascimento, Matzen, Sara Hyldig, Andersen, Mads Hald, Hviid, Thomas Vauvert F.

Journal:

Cellular Immunology

Year:

2017

Language:

english

File:

PDF, 2.24 MB

english, 2017

49

Mash: fast genome and metagenome distance estimation using MinHash

Ondov, Brian D., Treangen, Todd J., Melsted, Páll, Mallonee, Adam B., Bergman, Nicholas H., Koren, Sergey, Phillippy, Adam M.

Journal:

Year:

2016

Language:

english

File:

PDF, 2.12 MB

english, 2016

50

Coding variants in RPL3L and MYZAP increase risk of atrial fibrillation

Thorolfsdottir, Rosa B., Sveinbjornsson, Gardar, Sulem, Patrick, Nielsen, Jonas B., Jonsson, Stefan, Halldorsson, Gisli H., Melsted, Pall, Ivarsdottir, Erna V., Davidsson, Olafur B., Kristjansson, Rag

Journal:

Communications Biology

Year:

2018

Language:

english

File:

PDF, 924 KB

english, 2018